Trends
Sci.
2026; 23(1): 10715
Repositioning of Angiotensin II Receptor Blockers for Alzheimer’s Disease:
An In-Silico Study
Juan David Garcés-Barraza1, Neyder Contreras-Puentes2,*, Isabella Manzur-Villalobos3, Antistio Alvíz-Amador4, Janer Zabaleta-Guzmán4 and Marlene Durán-Lenguas5
1TOXSA, Medicine, Rafael Núñez University Corporation, Cartagena, Colombia
2GINUMED, Medicine, Rafael Núñez University Corporation, Cartagena, Colombia
3Departament of Pharmacology, University of Cartagena, Cartagena, Colombia
4Pharmacology and Therapeutics group, Pharmaceutical Chemistry Program, University of Cartagena,
Cartagena, Colombia
5FARMABAC, Medicine Program, University of Cartagena, Cartagena, Colombia
(*Corresponding author’s e-mail: [email protected])
Received: 20 May 2025, Revised: 21 July 2025, Accepted: 28 July 2025, Published: 20 October 2025
Abstract
The brain renin-angiotensin-aldosterone system (RAAS), through angiotensin II and its AT1 and AT2 receptors, plays a pivotal role in blood pressure regulation and has been implicated in neurodegenerative processes such as Alzheimer's disease (AD). Angiotensin II receptor blockers (ARBs) inhibit the activation of AT1 receptors, thereby favoring an alternative RAAS pathway mediated by angiotensin IV (Ang-IV) and the AT4 receptor, providing protective effects for the nervous system. In this study, an In-silico evaluation of eight ARBs was performed by molecular docking (AutoDock Vina) and molecular dynamics simulations (AMBER20), assessing their binding affinity and conformational behavior with AT1 and AT2 receptors. Telmisartan and candesartan exhibited the highest affinity for AT1, with binding energies of −10.57 ± 0.12 and −9.83 ± 0.06 kcal/mol, respectively. For AT2, telmisartan showed a binding affinity of −10.60 ± 0.00 kcal/mol, although lower than the control ligand (−13.50 kcal/mol). Molecular dynamics simulations revealed that the AT1-telmisartan and AT1–candesartan complexes maintained structural stability with RMSD values remaining below 2.5 Å. The AT1–telmisartan complex exhibited the smallest radius of gyration (< 20 Å) and a reduced solvent accessible surface area (SASA), suggesting a compact and stable conformation. In contrast, the AT2–telmisartan complex demonstrated increased structural fluctuations (RMSF) within amino acid regions 60 - 75, 105 - 120 and 230 - 245, although overall stability was preserved throughout the 100 ns of simulation. These findings suggest that telmisartan and candesartan are promising candidates for modulating brain RAAS and could be considered as potential agents in Alzheimer's disease. Further in vivo validation is warranted to confirm their neuroprotective effect.
Keywords: Alzheimer’s disease, Angiotensin II receptor blockers, Renin-angiotensin system, Molecular docking, Molecular dynamics simulation
Introduction
Angiotensin II receptor blockers (ARBs) exert beneficial effects by inhibiting the AT1 receptors of angiotensin II, inducing a decrease in vasoconstriction and fluid retention and therefore into cardiovascular improvements [1]. Additionally, some ARBs activate the nuclear receptor PPAR-γ, generating anti-inflammatory and antioxidant effects useful in diseases such as diabetes and cardiovascular disorders [2].
At the renal level, ARBs reduce proteinuria and slow the progression of chronic kidney disease, directly countering arteriolar vasoconstriction and aldosterone stimulation induced by angiotensin II [3]. In the central nervous system (CNS), shown to improve cognitive function and exert neuroprotective effects in Alzheimer’s disease (AD), which is attributed to their action on the brain renin-angiotensin system, particularly in the aminopeptidase/Ang IV/AT4 receptor axis [4,5]. This activation of the alternative axis reduces reactive oxygen species and microglial activation, promoting an anti-inflammatory environment in the CNS [6].
Likewise, through the circumventricular organs (CVO), the peripheral system allows the passage of components of the RAAS to the brain, while the central pathway connects the hypothalamus with the medulla oblongata through structures such as the area postrema (AP) and the solitary tract nuclei (NST), responsible for the local production of angiotensin [4,7,8]. The activity of the brain RAS is also involved in neuronal plasticity, the control of oxidative stress, and neurogenic inflammation [9].
The AT1 receptor favored inflammatory and oxidative processes; its inhibition promoted the conversion of Ang II to Ang IV, improving cognition in animal models [3]. The AT4 receptor, activated by Ang IV, has been shown to restore spatial memory, improve cerebral flow and promote neuroprotection [5,10]. On the other hand, the AT2 receptor, present in the adult brain, acts on a non-classical pathway that generates Ang (1–7) through the action of ACE2, which exerts protective effects via the Mas receptor. Additionally, the brain also contains angiotensin III and IV. The neuronal isoform renin-b, for its part, antagonizes the effects of renin-a, contributing to a neuroprotective effect of the cerebral RAS [11].
ARBs such as losartan, candesartan and telmisartan are studied in Alzheimer’s disease, given that hypertension is a vascular risk factor for this neurodegenerative disease [12]. The brain RAAS contains the necessary elements for active central function and the binding of Ang II to the AT1 and AT2 receptors, including active peptide Ang IV to the AT4 receptor, are associated with vascular, neuronal and cognitive effects [3,13]. ARBs can treat mild cognitive impairment, delay cognitive decline in Alzheimer’s patients and prevent cerebrovascular dysfunction and accumulation of beta-amyloid proteins [10,14]. The pharmacokinetic characteristics of some ARBs, mainly candesartan and telmisartan, favor their activity at a central level due to their ability to cross the blood-brain barrier [15].
Therefore, with the advancement of technology, In silico studies have been promoted as deeper tools for the explanation of potential mechanisms. Methodologies such as molecular docking, structure-activity relationship (SAR), pharmacophore modeling and molecular dynamics simulations have emerged as complementary approaches that enable the prediction of novel therapeutic targets, the optimization of drug candidates and preliminary exploration of possible molecular pathways implicated in pathologies such as Alzheimer’s disease [16].
The objective is to allow the In silico evaluation of drugs such as ARBs against AT1 and AT2 receptors, linking their direct activity to the local brain Renin-Angiotensin-Aldosterone System (RAAS), performing a predictive analysis and conducting receptor affinity and conformational studies.
Materials and methods
Preparation of receptors
A preliminary search for potential crystal structures for molecular docking was conducted. These crystals were selected according to optimal resolution, adequate validation (Ligand Structure Quality Assessment) and the presence of co-crystallized ligands that allow validation of the docking. Thus, a search was performed for Type 1 and 2 angiotensin II receptors in UniProt (P30556 - AGTR1_HUMAN and P50052 - AGTR2_HUMAN), where 6 and 7 structures were identified, respectively (See Supplementary Material Tables S1 and S2).
The protein structures of the angiotensin II receptors as AT1 and AT2 were obtained through the Protein Data Bank (PDB) database, identified with the codes 4ZUD (resolution: 2.80 Å) and 5UNF (resolution: 2.80 Å), respectively. Previously, the crystals were evaluated for missing residues and completed using pdb4AMBER, continuing with the observation of the viability of the structures through the Ramachandran plot, using RampPlot [17]. (Supplementary Material - Figures S1 - S8)
Subsequently, the crystal structures were prepared using AutoDock Tools (ADT; v.1.5.6) [18], following the stages of removing water molecules and additional ligands, incorporating hydrogens, adding Kollman charges and fusion of non-polar hydrogens. Finally, it was saved in pdbqt format for the development of molecular docking.
Ligand selection and preparation
Based on previously published experimental studies regarding the hypothetical role of ARBs as candidates in the treatment of Alzheimer’s disease, 8 molecules were selected and downloaded in sdf format using the PubChem database. Next, the proteins were geometrically optimized using the Gaussian 09W software, applying the theoretical DFT(B3LYP)/6-31+G(d) optimization method, to obtain a stable energy conformation before molecular docking.
Each molecule once optimized was saved in mol2 format, then prepared using AutoDock Tools with the addition of hydrogens, Gasteiger charges and removal of non-polar hydrogens; Finally, each structure was converted into pdbqt format through Open Babel tools v2.3, with the --gen3d parameter enabled and default settings [19].
Molecular docking
The selection of boxes location and size of the boxes was guided by the position of key residues identified in co-crystallized structures and in previous studies. The optimal conformation of each complex was determined based on the lowest binding energy and root-mean-square deviation (RMSD) ≤ 2.0 Å relative to the reference pose. Automatic clustering was not applied.
Each molecular docking run was executed in triplicate using AutoDock-Vina v.1.1.2 [20]. For this, a grid spacing of x = –40.989 Å x y = 63.050 Å x z = 20.015 Å for AT1 and x = 80.966 Å x y = -3.189 Å x z = 36.769 Å for AT2 was used, respectively. Additionally, the dimensions of the boxes were x = 16.823 Å x y = 13.67 Å x z = 14.20 Å for AT1 and x = 18.46 Å x y = 18.22 Å x z = 20.36 Å for AT2. The best poses for each system were considered and the energy affinity values were expressed in terms of kcal/mol ± standard deviation (SD). The interactions between the complexes obtained were visualized using the Discovery Studio Visualizer program v.21.1 [21].
Molecular dynamics simulation
The complexes for AT1 and AT2 with the best energy score and reference molecules were subjected to molecular dynamics (MD) simulations. Unconstrained MD simulations were performed for all atoms using AMBER20 software. The minimization, equilibrium and production procedures were developed according to the protocol of Alviz-Amador et al. [22]. The ff14SB and GAFF2 force fields were applied to the respective receptors and ligands.
TIP3P water-solvated structures were subjected to minimization that included 1,000 steep descent steps, continuing with 1,000 conjugate gradient minimization steps. Additionally, a constant force constraint of 25 kcal/mol-Å2 was applied. Next, a heating process was executed using 5,000 steps from 100 K to 300 K, with time intervals of 2 femtoseconds (fs). During this heating, a loosely coupled thermostat was used at constant pressure and bonds involving hydrogen were constrained using the SHAKE algorithm, with a tolerance set to 0.00001. Interactions were established at a non-bonded cutoff radius of 8 Å.
Subsequently, the restrictions applied to peptides and proteins were gradually reduced from 5 to 0.5 kcal/mol-Å2 in five steps. An initial minimization was performed with 1,000 steps descent steps, followed by 500 steps of conjugate gradient minimization, using a time of 2 femtoseconds (fs). Then, a 50 picoseconds (ps) molecular dynamics simulation was carried out at 300 K, with constant pressure and temperature using Berendsen constants of 0.2 ps. The stability of the system during the equilibrium phase was confirmed by monitoring the temperature and pressure curves. The total simulation time is 100 ns.
Subsequently, root mean square deviation (RMSD) analysis, mobility analysis using root mean square fluctuation (RMSF), radius of gyration (Rg) measurement and solvent accessible surface area (SASA) were performed. The analyses were executed using the CPPTRAJ program [23].
Binding free energy calculations
The MM-GBSA method was used with the MMPBSA.py tool to determine the binding affinity of different ligands to the receptor [24]. A total of 100 ns were extracted from the molecular dynamic’s simulation and the ΔGTotal was calculated following the methodology developed by Alviz-Amador et al. [22]. Calculating the free energy (ΔG), the protein’s entropic contribution was excluded because the binding energy was used to determine the relative binding strength of each complex without considering the effect of entropy in the calculation. The analysis focused on relative comparisons between complexes. Energy efficiency per residue was not assessed.
Results and discussion
Research shows that the brain’s renin-angiotensin-aldosterone system (RAAS) is linked to the development of Alzheimer’s disease (AD), making it a hopeful target for finding effective treatments for this brain disorder. Over the years and with multiple investigations worldwide, angiotensin II receptor inhibitors (ARBs) have emerged as a relevant therapeutic option for patients affected by this pathology.
Preclinical and clinical studies support the efficacy of ARBs in Alzheimer’s disease (AD). Danielyan et al. found that losartan greatly lowered the buildup of beta-amyloid plaques and helped improve thinking skills in mice with Alzheimer’s disease [25]. Deng et al. suggested that ARBs are associated with a lower risk of dementia compared to other antihypertensive drugs [26]. Similarly, the positive effects of ARBs on brain inflammation were emphasized, strengthening the proof of their protective benefits for the brain [27]. Ongali et al. Ongali et al. demonstrated that losartan prevents and reverses cerebrovascular, neuropathological and cognitive deficits associated with AD [28].
Subsequent studies examined different ARBs in animal models of AD, suggesting these drugs reduce the accumulation of β-amyloid plaques and significantly improve cognitive function [29-31]. Alike, it has been revealed that candesartan can protect against brain disorders associated with aging and senescence [32]. The latest findings highlight the ability of candesartan to protect against D-galactose-induced neurotoxicity and memory deficits through modulation of autophagy and oxidative stress, suggesting its potential as a promising candidate for age-related neurodegenerative disorders and memory deficits [33].
Clinical studies and meta-analysis have evidenced that patients treated with ARBs exhibit a decreased risk of Alzheimer’s disease relative to other antihypertensive medications (RR = 0.78, 95% CI 0.68 - 0.88; p-value < 0.001) [34]. Similarly, ARBs may diminish the risk of Alzheimer’s disease, maybe through supplementary neuroprotective mechanisms outside blood pressure regulation [35]. In contrast, Medications that stimulate AT2/AT4 receptors had a lower association with dementia compared to inhibitors such as ACE inhibitors [36].
The studies provide robust evidence of therapeutic benefits of ARBs, especially Candesartan and Telmisartan, in Alzheimer’s disease (AD), through diverse mechanisms including anti-inflammatory action and enhancement of cerebrovascular integrity. These results support the consideration of ARBs as valuable therapeutic options in AD and underline the need for future research to completely understand their mechanisms of action and optimize their clinical application.
Molecular docking
Eight ligands corresponding to ARB drugs with AT1 and AT2 receptors were evaluated and the ligand with the highest affinity for each receptor type was determined (Supplementary Material - Figures S9 and S10). For the molecular docking, it was observed that two ligands, telmisartan and candesartan, exhibited a greater affinity with the AT1 receptor compared to the reference ligand, with binding energies of –10.57 ± 0.12 and –9.83 ± 0.06 kcal/mol, respectively, compared to the energy of the reference ligand binding at –9.50 ± 0.00 kcal/mol. These results suggest that both molecules have an enhanced affinity for the AT1 receptor. (See Table 1 and Figure 1).
Table 1 Main ARBs that interact with AT1 and AT2 receptors.
Protein |
Ligand |
Binding energy (kcal/mol ± SD) |
Hydrophobic interaction |
H-bond interaction |
AT1 receptor |
Telmisartan* |
–10.57 ± 0.12 |
Y35, F77, Y108, S109, A181, I288, Y292, Y293, W253 |
R167 |
Candesartan* |
–9.83 ± 0.06 |
W84, V108, A181, M234, I288 |
Y35 |
|
Azilsartan |
–9.47 ± 0.12 |
W84, V108, L112, K199, W253, I288, Y292 |
R167 |
|
Ibersartan |
–9.40 ± 0.00 |
Y35, W84, Y92, V108, W253, I288, M284 |
T88 |
|
Olmesartan |
–9.00 ± 0.00 |
Y35, W84, Y87, Y92, V108, R167, W253, I288, M284 |
T88 |
|
Losartan |
–8.77 ± 0.06 |
W84, V108, R167, Y184, M284, I288 |
Y35, F182 |
|
Eprosartan |
–8.50 ± 0.00 |
Y35, F77, W84, Y87, Y92, V108, R167, I288 |
167 |
|
Valsartan |
–8.27 ± 0.15 |
Y35, W84, Y87, Y92, V108, R167 |
- |
|
OLMa |
–9.50 ± 0.00 |
W84, Y87, Y92, Y108, R167, H256, M284, P285, Y292 |
Y35, T88 |
|
AT2 receptor |
Telmisartan* |
–10.60 ± 0.00 |
L93, W100, L124, R182, M214, F272, I304, F308 |
K215 |
Ibersartan |
–10.03 ± 0.12 |
W100, L124, T125, M128, I304, F308 |
T125, R182 |
|
Azilsartan |
–9.47 ± 0,45 |
W100, L124, T125, M128, R182, M197, M214, K215, W269, I304, F308 |
T125, R182 |
|
Olmesartan |
–9.37 ± 0.06 |
W100, Y104, Y108, L124, T125, M128, R182, F272, I304 |
C195, K215 |
|
Eprosartan |
–8.93 ± 0.06 |
L93, L124, M128, K215, W269, L300, I304, F308 |
W100, R182 |
|
Losartan |
–8.87 ± 0.06 |
Y51, W100, Y108, L124, M128, I304 |
Y103, C195, K215 |
|
Candesartan* |
–8.70 ± 0.17 |
L93, W100, T178, M214, K215, I304 |
T125, R182 |
|
Valsartan |
–8.23 ± 0.21 |
W100, Y103, L124, I304, F308 |
T125, R182 |
|
8ES |
–13.50 ± 0.00 |
W100, Y108, T125, R182, C195, W209, M214, K215, I304, F308 |
L124, T178 |
aCocrystalized ligand AT1 receptor; bCocrystalized ligand AT2 receptor; *ARBs that crosses the BBB
Figure 1 Important interactions between reference inhibitors and ARBs against AT1 receptor. A. Telmisartan; B. Candesartan; C. OLM: Selective inhibitor of AT1 receptor.
A critical residue in the docking of these three ligands is Tyr35(1.39 Å), evidencing a hydrogen bond between this residue and the imidazole group of ligands. These findings support the research of Zhang et al., who pointed out that this hydrogen bond is crucial for the stability and specificity of the binding of the ligand to the receptor pocket, a fundamental aspect for the pharmacological activity of AT1 receptor antagonists such as olmesartan, candesartan and telmisartan [37].
In the molecular docking analysis of AT1 receptor, it has been reported that the tetrazole ring of candesartan can form both salt bridge and H-bond interactions with Arg167 (ECL2), while the carboxyl group is oriented toward Lys199 [38]. Additionally, the biphenyl structure of candesartan engages in aromatic interactions with Trp84, which in turn can generate stabilization through a hydrogen bond with Tyr35. Furthermore, residues such as Val108, Met284 and I288 enhance ligand anchoring within the binding pocket. Similarly, telmisartan has been shown to form an H-bond with Arg167 and together with Lys199 can establish a bidentate interaction with the positively charged residues in the binding pocket site [39].
It has been suggested that Tyr92 in ECL1 plays a key role in π-π stacking interactions at the pocket entrance, critically influencing ligand affinity. Aromatic residues such as Trp253, located in helix VI, further reinforce binding through hydrophobic and π-π interactions. Regarding the OLM analogue, the ligand is positioned within the binding pocket, where the carbamoyl group interacts with H-bonds of helix II, including Thr88 and Tyr35. Similarly, studies show that Tyr35 interacts with OLM analogues through binding to Tyr87/Thr88. Similarly, it has been observed that His256 and Pro285 promote ligand interaction, whereas residues such as Val108, Ile288 and Tyr292 enhance hydrophobic core binding, which are consistent of the findings in the research [37-40].
The evaluation of AT2 receptor identified specific residues, such as Arg182, Thr125 and Thr178, located in the ligand binding pocket region, which plays a crucial role in interactions with the AT2 receptor [41]. It has been indicated that neither telmisartan nor candesartan presented a higher affinity than the reference ligand 8ES, which exhibited a binding energy of –13.50 ± 0.00 kcal/mol. It is crucial to note that telmisartan demonstrated a considerably better affinity, with binding energies of –10.60 ± 0.00 kcal/mol, compared to those recorded for candesartan, which was –8.70 ± 0.17 kcal/mol. All three residues are critical in docking the ligands (Candesartan, telmisartan and the reference ligand 8ES) with the AT2 receptor (See Table 1 and Figure 2). Both Arg182, Thr125 and Thr178 form a hydrogen bond with the tetrazole ring of the ligands [41]. These critical interactions for selective ligand binding to AT2 contribute to the diversity of ligand binding between the two types of angiotensin II receptors.
Figure 2 Important interactions between reference inhibitors and ARBs against AT2 receptors. A. Telmisartan; B. Candesartan; C. 8ES: Selective inhibitor of AT2 receptor.
Furthermore, the mutation of Arg182 to Ala182 has been shown to significantly reduce ligand affinity and activation of intracellular signaling, indicating that Arg182 is important for receptor function. It has been demonstrated that the tetrazole ring in both candesartan and the co-crystallized analogue interacts with Arg182 (ECL2) through hydrogen bonding, as previously reported in other studies. These interactions have been associated with ligand anchoring and enhanced binding affinity. In contrast, Arg182 with telmisartan primarily forms an H-bond with the carboxylate group of the ligand. Similarly, the carboxylate moiety of telmisartan established a strong salt bridge with Lys215, which may facilitate the anchoring of telmisartan analogues [42]. At the level of the hydrophobic contour of the AT2 receptor, candesartan interacts with Trp100 and Met214, which contribute to structural compaction. Unlike earlier studies that describe interactions with the biphenyl ring, Trp100 in this context appears to interact with the benzimidazole moiety [43].
For the telmisartan-AT2 receptor complex, contacts are distinguished between biphenyl and benzimidazole rings and extended residues such as Leu93, Trp100, Met214, Ile304; Furthermore, interactions with Phe272 and Phe308, with the latter perhaps penetrating more into the receptor binding pocket, which may explain variations in binding affinity. Moreover, the structure of the co-crystallized analogue extends toward Tyr108 and Cys195 near the pocket entrance. A carbonyl group of the quinazolinone core forms an H-bond with Tyr108 (helix III), contributing to ligand stabilization. Meanwhile, Cys195 remains close, participating in the van der Waals interactions that influence ligand closure within the binding site [42].
Molecular dynamics
In the AT1 systems, structural folding, as indicated by the RMSD values, remained moderately fluctuating in the first 50 ns of simulation. The RMSD of the inhibitory ligands linked to AT1 exhibited improved structural stability, reaching values less than 2 Å after 50 ns, maintaining proper folding based in the criteria by Deng et al. [44] (Figure 3(A)). Additionally, AT1-native, AT1-telmisartan and AT1-Cocrystal generally maintain greater stability throughout the simulation, reaching values lower than 2.5 Å.
Figure 3 Molecular dynamics analysis of co-crystallized candesartan, telmisartan and inhibitor bound to the AT1 receptor. A. Root Mean Square (RMSD). B. Root means square fluctuation (RMSF). C. Radius of gyration (RoG). D. Solvent-accessible surface area (SASA).
Regarding the RMSF results, AT1-Telmisartan demonstrated increased flexibility in the region spanning residues 100 to 135 aa, with greater fluctuation compared to other systems (Figure 3(B)); likewise, AT1-Candesartan complex exhibited elevated mobility between 195 to 210 aa. It has been reported that local flexibility on the receptor can influence ligand interactions; specifically, telmisartan binding to AT1 does not maintain complete rigidity in the ECL1 loop around of TM3, resulting in increased flexibility in this region. Residues such as Ser105 and Ser109 (TM3), are stabilized via hydrogen bonding with ARBs containing tetrazole rings [45].
On the other hand, it has been observed that telmisartan, compared to candesartan, has a less intense interaction with Tyr92 (ECL1). Moreover, in certain studies, the mutation of Tyr by Ala results in a decrease in the affinity of telmisartan, suggesting that its contribution to binding is indirect, as well as to the stabilization of Arg167. Therefore, the ECL1 loop remains slightly more flexible with telmisartan compared to other ligands [37].
Only the AT1-Candesartan system initially presents 3 Å records that subsequently reach stability. The RMSF indicated mobilities in the amino acid sequences between CLSIDRYLAIVHPTMLVAKVT for the AT1-Telmisartan system where it reached values of 5 Å for the other systems. Similarly, a pronounced fluctuation is present in the AT1-Candesartan system, associated explicitly with the TLIWKALNDDIFKIIM sequence. However, it is not directly related to the area of the residues involved in catalysis, indicating possible structural changes or mobilities with candesartan. However, when relating key residues in interaction, such as Arg167, it has been shown that in the area close to the amino acid, slight changes in mobility are observed for the other systems evaluated, which tend to be more conserved than the native protein [37].
Regarding the radius of gyration (Rg), lower values were evident for AT1-Telmisartan, showing values lower than 20 Å in comparison to other systems (Figure 3(C)). The AT1-Telmisartan system was identified to present greater compactness in contrast to all the systems by showing a lower value, which may be associated with the presence of interactions and factors such as the spatial distribution of the ligands in the protein, the number and type of contacts per residue, which are modifiers independent of the size of the protein [46]. For the behavior of SASA in AT1, it was evidenced that ARBs and the co-crystallized molecule presented a similar behavior when compared to the native protein, with lower values being recorded in AT1-Telmisartan and AT1-Candesartan (Figure 3(D)). The SASA values demonstrated that the inhibitors, including Telmisartan, showed a tendency to generate restricted accessibility, which indicates a certain degree of considerable affinity on the binding site, resulting in an indicator of stability to the receptor.
In the molecular dynamics simulations for AT2, it was shown that the RSMD values were usually below 3 Å, with more significant changes seen with AT2-Telmisartan, which had values over 2 Å compared to the original protein (Figure 4(A)). The results show a better folding profile and structural stability for the latter two, due to maintaining RSMD value averages lower than 2 Å. However, although the AT2-telmisartan system showed higher values, it maintained considerable stability according to what was outlined by Deng et al. [44]. In the AT2 systems, the molecule that showed the biggest changes was AT2-telmisartan, which had many ups and downs in the regions between amino acid residues 60 - 75, 105 - 120, 135 - 150 and 230 - 245 (Figure 4(B)).
Figure 4 Molecular dynamics analysis of co-crystallized candesartan, telmisartan and inhibitor bound to AT2 receptor. A. Root Mean Square (RMSD). B. Root means square fluctuation (RMSF). C. Radius of gyration (RoG). D. Solvent-accessible surface area (SASA).
RMSF only showed notable variations with AT2-telmisartan in sequences such as TYYSYRYDWLFGPVMC, where key catalytic site residues such as Trp100 and Tyr104 are identified, which may present interaction with aromatic groups of ARBs [41]. On the other hand, variations have been described in areas of amino acid residues between WMGVINSCEVI and even though fluctuations occur in these regions, key residues in the activity of the receptor are not shown. Regarding the behavior of the radius of gyration, minimal variations were evidenced between all the studied simulations; however, for the three inhibitors evaluated, a lower value was noted throughout the entire simulation when compared with the AT2-Native system (Figure 4(C)). Similarly, the SASA values in AT2 were similar in the ARB and Co-crystallized drugs, which fluctuated to a lesser extent and even from 50 ns onwards when contrasted with AT2 without the presence of ligands (Figure 4(D)).
The MMGBSA method was used to calculate the binding free energy results, as shown in Table 2. The table presents the components that contribute to the binding free energy of the AT1 and AT2 receptor complexes with ARB analogs and controls. Notably, the total value of the binding free energy (ΔGTOTAL) in all systems obtained was negative, suggesting a favorable binding interaction. However, AT1-Telmisartan showed a higher energy value than AT1-Candesartan and AT1-control, coinciding with the results obtained by molecular docking. Likewise, it was evidenced that AT2-Control presented the highest activity, followed by AT2-Telmisartan, with a better energy score than AT2-Candesartan.
Table 2 Binding free energy components (kcal/mol) of AT1 and AT2 receptors and ARBs and control by MMGBSA method.
Energy component |
VDW |
EEL |
EGB |
ESURF |
ΔGgas |
ΔGsolv |
ΔGTotal ± SD (kcal/mol) |
|||||||
AT1-Telmisartan |
–69.32 |
–4.83 |
16.03 |
–7.49 |
–74.15 |
8.55 |
–65.69 |
|||||||
AT1-Candesartan |
–63.12 |
–28.99 |
41.49 |
–6.91 |
–92.12 |
34.59 |
–57.53 |
|||||||
AT1-Control (OLM) |
–12.22 |
–88.23 |
39.53 |
–2.28 |
–45.63 |
37.25 |
−8.38 |
|||||||
AT2-Telmisartan |
–60.95 |
55.06 |
-43.78 |
–6.89 |
–5.90 |
–50.67 |
–56.56 |
|||||||
AT2-Candesartan |
–51.81 |
–14.90 |
28.69 |
–5.66 |
–66.71 |
23.02 |
–43.69 |
|||||||
AT2-Control (ES8) |
–79.92 |
53.45 |
–34.72 |
–8.84 |
–26.48 |
–43.56 |
–70.04 |
|||||||
EEL: Electrostatic energy, EGB: Summation of electrostatic, ESURF: Surface energy, ΔG gas: Gibb’s energy in the gas phase ΔG sol: Gibb´s energy in aqueous phase, ΔG Total: Total Gibb´s energy, VDW: Van der Waals.
The ΔGTotal values obtained by MMGBSA were negative for all complexes, indicating a thermodynamically favorable interaction. AT1-candesartan showed a more favorable ΔGTotal than AT1-telmisartan, consistent with its more stable hydrophobic interaction profile. In AT2, although the control was superior, telmisartan outperformed candesartan in ΔGTotal. These findings suggest that affinity depends not only on the total free energy but also on the distribution of specific interactions and the structural stability of the complex. Electrostatic energy and van der Waals interactions were determinants of the ligand’s greater affinity for AT1. In AT2, the data highlights the functional role of residues such as Arg182 and Trp100 in the effective binding of telmisartan.
Conclusions
This in silico study indicates that ARBs, particularly telmisartan and candesartan, due to their capacity to traverse the blood-brain barrier, demonstrate a strong affinity for AT1 and AT2 receptors, potentially elucidating their modulatory effects on the brain renin-angiotensin system, which is involved in the pathophysiology of Alzheimer’s disease. Molecular docking revealed significant interactions of telmisartan and candesartan with the AT1 and AT2 receptors; specifically, Arg167, Tyr35 and Trp84 were identified for AT1, which are crucial for the ligands’ affinity and inhibitory efficacy. In the AT2 receptors, Trp100, Thr125, Arg182 and Met214 were identified as contributors to the anchoring process and selectivity of ARBs, characterized by their binding capability through polar and hydrophobic contacts, indicating diversity in affinity throughout the receptor. Molecular dynamics simulations, conversely, validated the structural stability of the complexes by the overall behaviour of RMSD, RMSF, SASA and RoG, with analogous trends in free energy, therefore corroborating the findings from molecular docking. Thus, it is confirmed that research will persist in substantiating the idea of the potential of these medicines for therapeutic repositioning in neurodegenerative disorders, including Alzheimer's Disease. Subsequent in vivo investigations and pharmacodynamic trials will be essential to corroborate these findings and progress towards clinical applications.
Acknowledgements
We thank the members of the Pharmacology and Therapeutics research group. As well as the members of the GINUMED of the Rafael Núñez University Corporation, Colombia.
Declaration of Generative AI in Scientific Writing
The authors are grateful for the use of generative AI tools, such as QuillBot, to correct grammatical errors in certain paragraphs of the manuscript. The authors did not use these tools to interpret the results or draw conclusions.
CRediT Author Statement
Juan Garcés-Barraza: Conceptualization, Methodology, Supervision, Validation, and Writing original draf. Neyder Contreras-Puentes: Conceptualization, Methodology, Supervision, Validation, and Writing original draf. Isabella Manzur-Villalobos: Formal analysis, Investigation, Validation, and Visualization. Antistio Alviz-Amador: Methodology, Formal analysis, Investigation, and Validation. Janer Zabaleta-Guzmán: Data curation, Formal analysis, and Visualization. Marlene Durán-Lengua: Project administration, Investigation, Supervision, Validation.
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